Clonal Evolution Visualization

Fishplot Generator:
Tumor Clonal Evolution & Dynamics

A web-based interactive fishplot tool for visualizing temporal dynamics of tumor subclones. Track clonal frequencies over time with smooth spline interpolation, parent-child relationships, and publication-quality figure export. Ideal for cancer evolution studies and liquid biopsy monitoring.

Temporal Dynamics

Visualize clone frequencies across multiple time points (diagnosis, treatment, relapse). Smooth spline interpolation shows clonal expansion and contraction patterns.

Clonal Hierarchy

Define parent-child relationships between clones to model tumor phylogeny. Support nested subclones and branching evolutionary trajectories with automated layout optimization.

Publication Ready

Generate publication-quality figures with customizable color schemes, time point annotations, and clonal labels. Export as PNG, PDF, or SVG for manuscripts and presentations.

Fishplot Parameters

Configure clonal evolution data and visualization

Data Input

FREQUENCY MATRIX (0-100%)

Parent-Child Relations

Define which clone is the parent (0 = root/ancestral)

Visualization Options

0.5
0.5

Time Point Labels

R backend supports 3 built-in demos. Custom data uses browser rendering.

0
Clones
0
Time Points
-
Dominant Clone
0%
Max Turnover

Fishplot

Clonal evolution visualization over time

Ancestral
Subclone

X-axis: Time progression | Y-axis: Clonal frequency (%)

Clonal Composition Over Time

Frequencies (%)
Enter data to view clonal composition