Evolutionary Analysis

Phylogenetic Tree

Visualize phylogenetic trees with circular layouts, bootstrap support values, and expression heatmap overlays. Built for ortholog gene family analysis across hibernating species.

Key Features

1

Circular layout

Radial tree with adjustable radius

2

Bootstrap display

Node support values as color/size

3

Heatmap overlay

Expression data aligned to tree tips

4

Tree types

Phylogram, cladogram, or fan layout

Color Palette

Analysis Tip

Upload your data in CSV/TSV format with tip labels as columns and genetic distance as rows. The tool will automatically generate a publication-quality phylogenetic tree ready for your hibernation omics manuscript.

Data Input

Upload Data

This tool generates random phylogenetic trees in Nature journal style using R ggtree.

Select a style below and click Generate to create a publication-quality tree.

Powered by R ggtree + ggtreeExtra

Style Details

Nature Communication

Fan layout, 2000 tips, Phylum abundance heatmap + SVM barplot

Nature Microbiology

Equal-angle layout, 400 tips, Form labels, tip annotations

Nature Biotechnology

Fan layout, 1000 tips, Clade highlight, Source/16S/GC tracks

Nature (Standard)

Fan layout, 200 tips, Phylum colors, Phage family stars

Phylogenetic Tree Visualization

Upload data and click "Generate Phylogenetic Tree" to visualize

Example Output

Input: Data matrix with Tip Labels and Genetic Distance

Input Format

Upload a CSV or TSV file with tip labels as columns and genetic distance as rows.

Output: Publication-quality phylogenetic tree

Output Features

Interactive phylogenetic tree with customizable colors, labels, and export options.