Multivariate Analysis

3D PCA Analyzer:
Interactive Dimensionality Reduction

A web-based interactive Principal Component Analysis tool supporting 3D visualization of high-dimensional data. Upload your expression matrix or trait data, perform real-time PCA computation, and explore sample relationships through rotatable 3D scatter plots with customizable grouping and labeling.

Real-time PCA Computation

Perform principal component analysis directly in the browser with optional data scaling and transposition. Supports high-dimensional biological data and trait matrices.

3D Interactive Visualization

Explore PC1, PC2, and PC3 in an interactive 3D scatter plot. Rotate, zoom, and pan to discover clustering patterns. Hover for sample details and variance explanations.

Grouping & Annotation

Upload sample metadata for color-coded grouping. Customize point shapes, sizes, and colors. Add text labels and export publication-quality figures in PNG or PDF format.

Waterfall Plot

Upload clinical + mutation data to generate oncoplot

Upload data.xlsx

Excel with sheets: 临床信息表, 突变基因

Upload variant.types.xlsx

Variant type mapping table

Computation Options

Visualization Options

6
10
0
Samples
0
Mutant Genes
0
Variant Types
0
Total Mutations

Oncoplot (Waterfall)

Mutation landscape visualization via maftools

Upload data.xlsx + variant.types.xlsx and click Generate Waterfall

Mutation Summary

Upload data to view mutation summary
No data loaded. Please upload data.xlsx and variant.types.xlsx.