JBrowse

Interactive Genome Browser

About JBrowse Integration

JBrowse is an open-source, interactive genome browser designed for visualizing and exploring genomic data with unprecedented speed and flexibility. Integrated into our Hibernating Animal Multi-omics Database, this powerful web-based platform enables researchers to seamlessly navigate large-scale genome sequences, view detailed gene annotations, and compare multi-layered omics datasets.

Supporting diverse data formats such as BAM, CRAM, VCF, GFF3, and BigWig, JBrowse 2 facilitates real-time exploration of genetic variations, gene expression patterns, and epigenetic modifications associated with seasonal torpor and metabolic regulation.

High-Performance Rendering Multi-omics Integration Session Sharing Responsive Design
Open in JBrowse.org
Current Genome: Spermophilus dauricus (Dauricus) | Assembly: sdauricus

Loading JBrowse 2...

NCBI Genome Data Viewer

Select a species from the dropdown above to explore its genome, annotations, and related datasets on NCBI.

How to Use JBrowse 2

Navigation
  • Use mouse wheel to zoom in/out
  • Click and drag to pan the view
  • Use the search box for genes/locations
  • Double-click to center view
Tracks
  • Click track names to configure
  • Drag tracks to reorder
  • Use the track selector to add data
  • Right-click for track options
Sharing
  • Generate shareable links to sessions
  • Export views as SVG/PNG
  • Save sessions for later access
  • Bookmark specific locations