Data Overview

The Chinese Horseshoe Crab (Tachypleus tridentatus) is included in the Hibernating Animal Multi-omics Database. This page catalogs publicly available multi-omics datasets curated from peer-reviewed literature. Currently 2 out of 6 omics data types have associated public datasets, comprising 5 datasets in total.

2
SRA Datasets
With public archive accessions
5
Total Datasets
2 omics types with data
2
Publications
Peer-reviewed DOIs linked
2/6
Omics Coverage
Out of 6 data types

Omics Datasets

DNA
Available

Genomics

BGISEQ-500

AccessionPRJNA215016
PlatformBGISEQ-500
RNA
Literature

Transcriptomics

Illumina RNA-Seq

StatusLiterature only
PlatformIllumina RNA-Seq
PRT
Literature

Proteomics

LC-MS/MS (venom proteome)

StatusLiterature only
PlatformLC-MS/MS (venom proteome)
MET
Not Available

Metabolomics

No publicly available metabolomics datasets were found in the literature for this species during systematic curation.

StatusNo public data
Last checked2025-01-01
Note-
EPI
Available

Epigenomics

Illumina HiSeq 2500 (WGBS)

AccessionPRJNA1088816
PlatformIllumina HiSeq 2500 (WGBS)
MIC
Literature

Microbiomics

16S + Shotgun Metagenomics

StatusLiterature only
Platform16S + Shotgun Metagenomics

Seasonal Sampling Timeline

Comprehensive sampling across the complete annual physiological cycle, capturing key transcriptional regulatory and metabolic transition nodes.

Active
April - September
Foraging & fat accumulation
Reproductive activity
Normal metabolic rate
Entry
October - November
Gradual metabolic decline
Thermoregulatory shift
Fat reserve mobilization
Deep Hibernation
December - February
Body temp drops to 4°C
Significantly reduced HR
Periodic arousal
Arousal
March
Rapid temperature recovery
Metabolic restart
Organ function restoration

Need Raw Data?

All omics data with SRA/GEO accession numbers can be directly downloaded from NCBI or GSA. Literature-only datasets may require contacting original authors.

Go to Download Center