Data Overview

The Asiatic Toad (Bufo gargarizans) is included in the Hibernating Animal Multi-omics Database. This page catalogs publicly available multi-omics datasets curated from peer-reviewed literature. Currently 3 out of 6 omics data types have associated public datasets, comprising 9 datasets in total.

6
SRA Datasets
With public archive accessions
9
Total Datasets
3 omics types with data
4
Publications
Peer-reviewed DOIs linked
3/6
Omics Coverage
Out of 6 data types

Omics Datasets

DNA
Available

Genomics

Illumina HiSeq 2500 (WGS, 94 populations)

AccessionPRJNA916180
PlatformIllumina HiSeq 2500 (WGS, 94 populations)
Dataset 2NC_030761
Platform 2Sanger (mitochondrial genome, 17,163 bp)
RNA
Available

Transcriptomics

Illumina HiSeq 2500

AccessionSRR11637930
PlatformIllumina HiSeq 2500
Dataset 2PRJNA506999
Platform 2Illumina HiSeq X10 (3 skin sites)
PRT
Literature

Proteomics

UPLC-Q-TOF-MS (venom metabolomics)

StatusLiterature only
PlatformUPLC-Q-TOF-MS (venom metabolomics)
MET
Literature

Metabolomics

GC-MS (bile acid metabolism)

StatusLiterature only
PlatformGC-MS (bile acid metabolism)
Platform 2GC-MS (lipid metabolism, Cd exposure)
EPI
Not Available

Epigenomics

No publicly available epigenomics datasets were found in the literature for this species during systematic curation.

StatusNo public data
Last checked2025-01-01
Note-
MIC
Available

Microbiomics

16S rRNA (metamorphosis, 4 stages)

AccessionPRJNA666156
Platform16S rRNA (metamorphosis, 4 stages)
Dataset 2PRJNA1143048
Platform 2Metagenomics (3 habitats, MAGs)

Seasonal Sampling Timeline

Comprehensive sampling across the complete annual physiological cycle, capturing key transcriptional regulatory and metabolic transition nodes.

Active
April - September
Foraging & fat accumulation
Reproductive activity
Normal metabolic rate
Entry
October - November
Gradual metabolic decline
Thermoregulatory shift
Fat reserve mobilization
Deep Hibernation
December - February
Body temp drops to 4°C
Significantly reduced HR
Periodic arousal
Arousal
March
Rapid temperature recovery
Metabolic restart
Organ function restoration

Need Raw Data?

All omics data with SRA/GEO accession numbers can be directly downloaded from NCBI or GSA. Literature-only datasets may require contacting original authors.

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